| Bio Users Guide:
| ||
|---|---|---|
| Prev | Chapter 3. Using | Next |
ClustalW is a multiple sequence alignment program. The version included with this distribution is v2.0.12.
ClustalW can be run at the command line as
[nostromo@xxx ~]$ clustalw2
**************************************************************
******** CLUSTAL 2.0.12 Multiple Sequence Alignments ********
**************************************************************
1. Sequence Input From Disc
2. Multiple Alignments
3. Profile / Structure Alignments
4. Phylogenetic trees
S. Execute a system command
H. HELP
X. EXIT (leave program)
Your choice:
|
Choosing the option 'H' brings up the help on clustalW.
Further information on the usage of ClustalW can be obtained from clustalw.doc(MS Word Document) available at /opt/bio/clustalw/doc/clustalw.doc on the frontend of your cluster.
